X-ray diffraction (XRD) is a powerful analytical tool for studying protein/peptide crystal structures, including information such as atomic arrangement, crystallinity, grain size, and defects. With decades of experience in developing and executing XRD analytical methods, CD Formulation uses XRD technology to provide reliable analytical support for the development and characterization of your protein/peptide drugs, from early development to late product release testing.
XRD is a technique for determining the atomic and molecular structure of a material by analyzing the way X-rays scatter when they interact with a crystalline sample. It involves shining a beam of X-rays onto a sample and measuring the resulting diffraction pattern, which consists of peaks and valleys corresponding to the spacing between atoms or molecules within the sample. By analyzing these diffraction patterns, mathematical methods are used to infer the atomic arrangement of the protein.
This method requires a high-intensity X-ray source and high-quality crystalline samples to obtain high-resolution structural information.It is the main technique for determining protein crystal structure.
X-ray diffraction is based on the constructive interference of monochromatic X-rays and a crystalline sample. These X-rays are generated by a cathode ray tube, filtered to produce monochromatic radiation, and then collimated and focused before being directed toward the sample. The interaction of the incident radiation with the sample produces constructive interference (and diffracted radiation) when the conditions satisfy Bragg's law ( n λ = 2 d sin θ ). This law relates the wavelength of the electromagnetic radiation to the diffraction angle and lattice spacing in the crystalline sample. These diffracted X-rays are then detected, processed, and counted.
Fig. 1 The principle of X-ray diffraction. (Mayer C, 2017)
At CD Formulation, our experienced protein scientists master the most advanced crystal structure analysis techniques and are adept at high-resolution protein/peptide crystal structure determination by XRD technology to support independent and integrated protein/peptide biopharmaceutical discovery projects.
Our laboratory is equipped with the most advanced XRD equipment in the world and has successfully determined hundreds of crystal structures with a high success rate.
Using cutting-edge XRD technology, we provide the following XRD-related services, including but not limited to:
We provide one-stop protein/peptide crystallization and crystal structure analysis services. With our XRD service, you can obtain detailed information about proteins at the atomic level, including the position, spacing, angles, etc. of atoms. These structural data can help you infer the functional mechanism, molecular recognition, and interaction of proteins with other biomacromolecules. In addition, this structural information can also be used for drug design and custom drug development.
Before this experiment can be performed, a high concentration of a purified protein sample is crystallized. By scanning the sample over a 2 θ angle range, a computer can record all possible diffraction directions of the lattice due to the random orientation of the protein crystals. The computer then uses mathematical equations with Fourier transforms to calculate the position of each atom and then generates a 3D digital image of the electron density. Finally, the electron density map and the X-ray diffraction pattern are used to build, adjust, and refine the protein model.
Fig. 2 Workflow for protein/peptide structure determination using X-ray diffraction. (CD Formulation)
Published Data
Technology: X-ray Diffraction and Polarized Raman Spectroscopy
Journal: Crystal Growth & Design.
IF: 3.2
Published: 2023
Results:
The authors used tetrapeptides as a model system and used X-ray diffraction and polarized Raman spectroscopy to study the hydrogen bond network in peptide crystals. Single-crystal X-ray diffraction was used to characterize the presence or absence of bifurcated hydrogen bonds in the peptide crystal structure. Raman spectroscopy was used to verify the relationship between the vibration frequency of the amide bond and the interatomic distance. The results showed that bifurcated hydrogen bonds existed in the peptide crystal structure and that the vibration frequency was linearly related to the interatomic distance.
Fig. 2 Crystal structure of tetrapeptide in a unit cell. (Tanase M, et al., 2015)
CD Formulation is dedicated to solving protein crystal structure challenges using state-of-the-art equipment and XRD techniques to accurately identify the arrangement of atoms within protein/peptide crystals and better understand their functions and their interactions with other molecules. Please feel free to contact us if you are interested in our services. Learn how our XRD technology can support the smooth implementation of your protein/peptide biopharmaceutical program.
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