In gene therapy products using viral vectors, the titer indicates the product content and the amount of virus. Viral titers are categorized into different types such as total particle number, genomic titer, infectious titer, and transduction titer. CD Formulation is dedicated to the development of gene therapy formulations. We specialize in providing comprehensive and professional technical support for the development of gene therapy formulations, including virus titer testing, related testing and quality control service programs.
Total particle number and genomic titer indicate the physical number of viruses and are physical titers. Infectious titer and transduction titer indicate the number of biologically active viruses and are biological titers. We can provide testing services for total particle number and transduction titer.
Adeno-associated virus (AAV) is a common viral vector for carrying and delivering therapeutic genes in gene therapy. Its titer assay is important in assessing the number of viral particles in AAV vector preparation. We currently use qPCR, digital PCR, enzyme-linked immunosorbent assay (ELISA), and cellular infection assay for AAV titer measurement. The specific choice of method needs to be decided based on the customer's actual experimental needs, the characteristics of the viral samples, and other factors. Below is a brief process we use when determining AAV titers.
We first need to prepare an AAV sample, which can be diluted appropriately for the AAV sample to be tested.
Using an appropriate primer design, a PCR reaction is performed to amplify the AAV genome from the samples.
A series of PCR reactions with known concentrations of AAV standard samples can be performed simultaneously to generate a standard curve.
The PCR reaction product is compared with the standard curve to determine the copy number of the AAV genome in the sample.
Based on the results of the PCR reaction, combined with the dilution of the sample, the titer of the AAV virus is calculated.
Fig.1 Adeno-associated virus titer testing. (CD Formulation)
Platforms & Technologies | Content Description |
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Droplet digital PCR (ddPCR) | As a highly sensitive and accurate quantification technique, ddPCR disperses the sample into thousands of microdroplets by microfluidics, each of which contains a very small amount of DNA molecules, enabling absolute quantification at the single-molecule level. This method is not dependent on a standard curve, providing greater accuracy and reproducibility, and is particularly suitable for titer determination of viral vectors such as AAV. |
Virus quantification by capillary electrophoresis | This is a technique that utilizes capillary electrophoresis to separate virus particles and detect them optically or chemically. It provides information on the size distribution and concentration of viral particles and helps to assess the purity and homogeneity of viral preparations. |
qRT-PCR | By quantitative reverse transcription polymerase chain reaction, the qRT-PCR method can quickly and sensitively detect genomic RNA copy numbers in lentiviral vectors, providing an effective means of quantifying viral vectors. |
Technology: rAAV infectious titer testing
Journal: Hum Gene Ther
IF: 3.9
Published: 2023
The article discusses the use of recombinant adeno-associated virus (rAAV) for gene therapy in treating various diseases and the need for reliable analytical methods to support this therapy. The TCID50 assay, which measures AAV infectivity, is traditionally difficult due to its variability. The study presents an optimization of this assay by using droplet digital PCR (ddPCR) for endpoint detection instead of the standard quantitative PCR (qPCR). Over 18 independent runs, the optimized method with ddPCR showed better interassay precision. The addition of a secondary threshold for scoring infectivity further improved precision. The study concludes with an optimized TCID50 method that enhances precision in rAAV infectious titer testing, which is crucial for process development and manufacturing in gene therapy.
Fig.2 Identification of adeno-associated viruses-2 viral genome replication using the ddPCR method. (Duong T, et al., 2023)
CD Formulation offers a viral titer testing service that plays an important role in gene therapy research for measuring viral load and virulence. If you are interested in us, please feel free to contact us.
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